Table 1

List of elementary flux patterns, projected cone elementary modes and projected elementary modes of SuN.

EFPs

EFP set

ProCEM

PEM

vector


E1

{9}

u1

p1

(0, 0, 0, 0, 0, 0, 0, 0, 1)

E2

{8}

u2

p2

(0, 0, 0, 0, 0, 0, 0, 1, 0)

E3

{1, 4}

u3

p3

(1, 0, 0, 1, 0, 0, 0, 0, 0)

E4

{1, 2, 3}

u4

p4

(1, 1, 1, 0, 0, 0, 0, 0, 0)

E5

{1, 5, 7}

u5

p5

(1, 0, 0, 0, 1, 0, 1, 0, 0)

E6

{1, 4, 6, 7}

u6

p6

(1, 0, 0, 1, 0, 1, 1, 0, 0)

E7

{1, 2, 3, 6, 7}

u7

p7

(1, 1, 1, 0, 0, 1, 1, 0, 0)

-

-

u8

p8

(1, 1, 1, 0, 1, 0, 1, 0, 0)

-

-

u9

p9

(1, 0, 0, 1, 1, 0, 1, 0, 0)

-

-

-

p10

(0, 0, 0, 0, 0, 0, 0, 1, 1)


Flux through reactions 1, . . ., 9, respectively, are the elements of the shown vectors. Zero vector and also the empty set are excluded.

Marashi et al. Algorithms for Molecular Biology 2012 7:17   doi:10.1186/1748-7188-7-17

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