Table 1

Number of RMSD computations for the 4state_reduced decoy dataset with varying RMSD threshold.

Decoy set

t = 2.4 Å

t = 2.8 Å

t = 3.2 Å

t = 3.6 Å

<a onClick="popup('http://www.almob.org/content/7/1/16/mathml/M1','MathML',630,470);return false;" target="_blank" href="http://www.almob.org/content/7/1/16/mathml/M1">View MathML</a>


1ctf

87,219

103,780

122,095

140,094

198,765

1r69

130,510

150,415

171,407

189,659

228,150

1sn3

106,523

124,587

147,101

174,527

217,470

2cro

183,135

206,133

189,277

221,219

227,475

3icb

130,653

119,774

139,425

176,184

213,531

4pti

106,581

131,345

175,432

191,091

236,328

4rxn

95,306

117,515

143,481

190,997

228,826


Total

839,927

953,549

1,088,220

1,283,751

1,550,545


Fogolari et al. Algorithms for Molecular Biology 2012 7:16   doi:10.1186/1748-7188-7-16

Open Data