|
Column scores on DIRMBASE 1. |
|||||
| Method (DNA) |
REF1 |
REF2 |
REF3 |
REF4 |
Total |
|
|
|||||
| DIALIGN-TX |
74.39 |
69.03 |
71.57 |
75.11 |
72.52 |
| DIALIGN-T 0.2.2 |
29.60-- |
28.63-- |
35.51-- |
35.85-- |
32.40-- |
| DIALIGN 2.2 |
69.950 |
68.190 |
71.250 |
72.480 |
70.47- |
| CLUSTAL W2 |
00.00-- |
00.00-- |
02.19-- |
04.99-- |
01.80-- |
| T-COFFEE 5.56 |
00.00-- |
00.18-- |
04.01-- |
08.44-- |
03.16-- |
| POA V2 |
05.63-- |
07.32-- |
04.12-- |
06.81-- |
05.97-- |
| MAFFT 6.240 L-INSi |
21.45-- |
11.93-- |
16.02-- |
22.30-- |
17.93-- |
| MAFFT 6.240 E-INSi |
40.28-- |
41.99-- |
45.77-- |
51.01-- |
44.76-- |
| MUSCLE 3.7 |
14.18-- |
16.18-- |
19.62-- |
30.43-- |
20.10-- |
| PROBCONSRNA 1.10 |
00.73-- |
00.05-- |
01.34-- |
04.31-- |
01.61-- |
|
Average column scores (CS) of the benchmarked programs on the core blocks of DIRM-BASE 1. The symbols are analogous to Table 1. | |||||
Subramanian et al. Algorithms for Molecular Biology 2008 3:6 doi:10.1186/1748-7188-3-6 |
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