|
Column scores of different programs on IRMBASE 2 |
|||||
| Method (Protein) |
REF1 |
REF2 |
REF3 |
REF4 |
Total |
|
|
|||||
| DIALIGN-TX |
64.17 |
77.36 |
70.30 |
72.23 |
71.02 |
| DIALIGN-T 0.2.2 |
67.040 |
75.810 |
70.400 |
70.440 |
70.930 |
| DIALIGN 2.2 |
68.520 |
73.32- |
65.34- |
69.50- |
69.17-- |
| CLUSTAL W2 |
00.00-- |
00.00-- |
00.11-- |
02.86-- |
00.74-- |
| T-COFFEE 5.56 |
34.84-- |
40.87-- |
43.62-- |
49.56-- |
42.22-- |
| POA V2 |
50.99- |
16.95-- |
11.79-- |
10.18-- |
22.47-- |
| MAFFT 6.240 L-INSi |
37.81-- |
39.54-- |
32.79-- |
38.75-- |
32.22-- |
| MAFFT 6.240 E-INSi |
45.70- |
52.37-- |
43.11-- |
54.82-- |
49.00-- |
| MUSCLE 3.7 |
04.65-- |
06.87-- |
14.80-- |
19.65-- |
11.49-- |
| PROBCONS 1.12 |
36.77-- |
43.47-- |
41.89-- |
43.56-- |
41.42-- |
|
Average column scores (CS) of the benchmarked programs on the core blocks of IRM-BASE 2. The symbols are analogous to Table 1. | |||||
Subramanian et al. Algorithms for Molecular Biology 2008 3:6 doi:10.1186/1748-7188-3-6 |
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