|
Summary of results for the leave one out analysis |
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| miRNA |
LOO score |
⩾ LOO score |
miRanda(s) |
⩾ miRanda(s) |
miRanda(e) |
⩾ miRanda(e) |
⩾ miRanda(se) |
|
|
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| cel-let-7 |
0.903 |
14869 |
119 |
92332 |
-15.46 |
60266 |
23992 |
| cel-miR-84 |
0.770 |
26677 |
106 |
190693 |
-10.19 |
150137 |
48538 |
| dme-miR-7 |
0.938 |
273 |
159 |
8868 |
-21.69 |
7227 |
2129 |
| dme-miR-4 |
0.890 |
745 |
131 |
11488 |
-8.51 |
184134 |
5325 |
|
"miRNA" gives miRBase accession of the miRNA sequence; "LOO score" gives mean score of the targets left out of the SBM; "⩾ LOO score" gives mean number of regions scoring equal to or greater than the left out sequence; "miRanda(s)" gives raw score of the miRanda hit of lowest scoring target region; "⩾ miRanda(s)" gives number of regions with returned using the maximal consistent score threshold; "miRanda(e)" gives minimum free energy (MFE) of the miRanda hit of the least stable target region; "⩾ miRanda(e)" gives number of regions with returned using the maximal consistent MFE threshold; "⩾ miRanda(se)" gives number of regions with returned using the maximal consistent combined score and MFE threshold. | |||||||
Moxon et al. Algorithms for Molecular Biology 2008 3:3 doi:10.1186/1748-7188-3-3 |
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