|
SBM scan summary obtained using a score threshold of 1 |
||||
| Organism |
miRNA |
Validated targets |
Recovered targets |
Potential novel targets |
|
|
||||
| C. elegans |
cel-miR-273 |
2 |
2 |
0 |
| C. elegans |
cel-let-7 |
15 |
15 |
1708 |
| C. elegans |
cel-miR-84 |
7 |
7 |
123 |
| D. melanogaster |
dme-miR-11 |
4 |
4 |
0 |
| D. melanogaster |
dme-miR-2 |
4 |
4 |
0 |
| D. melanogaster |
dme-miR-4 |
8 |
8 |
23 |
| D. melanogaster |
dme-miR-7 |
15 |
15 |
28 |
| M. musculus |
mmu-miR-124 |
3 |
3 |
0 |
| M. musculus |
mmu-miR-206 |
3 |
3 |
0 |
| H. sapiens |
hsa-miR-1 |
4 |
4 |
0 |
| H. sapiens |
hsa-miR-122 |
3 |
3 |
0 |
| A. thaliana |
ath-miR-163 |
5 |
5 |
0 |
| A. thaliana |
ath-miR-172 |
6 |
6 |
0 |
| A. thaliana |
ath-miR-390 |
1 |
1 |
0 |
| A. thaliana |
ath-miR-398 |
2 |
2 |
0 |
| A. thaliana |
ath-miR-408 |
2 |
3 |
1 |
|
"miRNA" gives miRBase miRNA identifier; "Validated targets" gives number of unique validated targets present in the starting alignment; "Recovered targets" gives number of validated targets in the input alignment that were recovered; "Predicted novel targets" gives number of candidate target sequences (other than the validated targets) predicted by the SBM method. | ||||
Moxon et al. Algorithms for Molecular Biology 2008 3:3 doi:10.1186/1748-7188-3-3 |
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